Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Smarca4

Cell type

Cell type Class
Others
Cell type
Tumor
NA
NA

Attributes by original data submitter

Sample

source_name
mouse tumor
genotype
SS18-SSX+
chip antibody
Brg1
strain
C57BL/6

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
28007775
Reads aligned (%)
98.0
Duplicates removed (%)
23.6
Number of peaks
239 (qval < 1E-05)

mm9

Number of total reads
28007775
Reads aligned (%)
97.9
Duplicates removed (%)
24.2
Number of peaks
244 (qval < 1E-05)

Base call quality data from DBCLS SRA